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12 Best Web Based Medical Billing Software

I've dug deep into healthcare tech, analyzed, and handpicked the 12 best web based medical billing software to ease your billing blues. Let's dive in!

  1. CollaborateMD - Best for comprehensive claim tracking
  2. Zoho for Healthcare - Best for integrations with other Zoho products
  3. CharmHealth - Best for telehealth and EHR functionality
  4. Medisoft - Best for affordability without sacrificing features
  5. AllegianceMD - Best for artificial intelligence utilization
  6. TotalMD - Best for flexible deployment options
  7. SAP Concur - Best for combining billing with travel and expense management
  8. Billiyo - Best for post-acute care providers
  9. Juvonno - Best for clinics with diverse disciplines
  10. InboxHealth - Best for patient communication and support
  11. EZClaim - Best for simplicity and ease of use
  12. Easy Billing Professional - Best for customization options and robust features

As someone who's been deep in the trenches of healthcare management, I understand the difficulties that come with medical billing. That's why I've taken the time to evaluate the best web-based medical billing software available today. Each tool on this list streamlines the billing process, making it more efficient and less error-prone for billing companies.

The benefits are clear: you'll save time, minimize errors, and improve your overall revenue cycle management. The major pain points these tools address include complex coding, missed charges, and time-consuming manual entry. So trust me when I say that the software solutions listed here could be just the solution you're looking for. Let's take a closer look at these fantastic options together.

What Is A Web Based Medical Billing Software?

Web based medical billing software is a digital platform that medical practitioners and medical offices employ to streamline their billing processes. Accessible from anywhere with an internet connection, these tools facilitate efficient management of patient billing cycles - from service coding, patient scheduling, reimbursement, messaging, and patient information, to insurance claim submissions and payment tracking.

Hospitals, clinics, private practices, and other healthcare providers predominantly use such systems. Their primary aim is to reduce administrative burdens, ensure accuracy in coding and billing, enhance revenue cycle performance, and ultimately improve patient satisfaction by offering transparent and timely billing.

12 Best Web Based Medical Billing Software Overview

1. CollaborateMD - Best for comprehensive claim tracking

CollaborateMD calendar dashboard
CollaborateMD's calendar dashboard

CollaborateMD is a powerful web-based medical billing software that helps practices manage and track their medical claims. This robust solution is designed to handle the complex billing needs of healthcare providers, ensuring every claim is handled meticulously.

Why I Picked CollaborateMD:

I chose CollaborateMD for its unparalleled commitment to providing thorough claim tracking, a feature critical in the healthcare industry. The rationale behind this selection is its unique ability to make claim management less daunting and more efficient. This is why CollaborateMD stands out as the best for comprehensive claim tracking—it's not just about managing claims but doing so in a way that's organized and systematic.

Standout Features & Integrations:

CollaborateMD provides a real-time claim tracking feature that lets you follow the claim from submission to final payment. It also offers automated claim scrubbing to prevent errors and ensure smooth submissions. CollaborateMD integrates well with a variety of EHR and practice management software, providing a unified platform for all your needs.


Pricing for CollaborateMD starts from $179/user/month. It offers an all-inclusive package with no hidden charges or extra costs.


  • Extensive claim tracking system
  • Automated claim scrubbing
  • Seamless integration with EHR and practice management systems


  • Higher pricing compared to other tools
  • Might be complex for beginners
  • No free trial available

2. Zoho for Healthcare - Best for integrations with other Zoho products

Zoho for Healthcare Web Based Medical Billing dashboard
Zoho for Healthcare's billing dashboard

Zoho for Healthcare is a comprehensive web-based medical billing software designed to streamline healthcare billing operations. It is a part of the larger Zoho ecosystem, allowing for extensive integration with other Zoho applications.

Why I Picked Zoho For Healthcare:

I selected Zoho for Healthcare for its integration capabilities with other Zoho products. Its capacity to interconnect with various tools within the Zoho ecosystem truly differentiates it from other billing software on the market. This integration feature is crucial for practices that already use Zoho applications, making Zoho for Healthcare the best for those seeking cohesive Zoho product integrations.

Standout Features & Integrations:

Zoho for Healthcare offers comprehensive billing features like automated billing, customizable invoices, and detailed financial reports. Additionally, it has a robust patient portal for better patient-provider communication. As a part of the Zoho ecosystem, it provides integration with Zoho CRM, Zoho Books, Zoho People, and more, creating a unified workflow across different aspects of your practice.


Zoho for Healthcare starts from $25/user/month. This pricing plan includes access to all Zoho for Healthcare features and integrations.


  • Wide range of integrations with other Zoho products
  • Detailed financial reports
  • Robust patient portal


  • Pricing might be steep for smaller practices
  • Requires time to learn and set up
  • Limited integrations with non-Zoho products

3. CharmHealth - Best for telehealth and EHR functionality

CharmHealth Medical Billing features
CharmHealth has a simple and easy-to-follow user interface

CharmHealth is a web-based medical billing solution that combines robust EHR capabilities with integrated telehealth functionality. This software presents an effective way for practices to manage billing while facilitating remote patient care.

Why I Picked CharmHealth:

CharmHealth captured my attention due to its unique blend of EHR and telehealth features within billing software. In an era where remote patient consultations have become vital, having telehealth and EHR functionalities integrated into your billing software is an absolute game-changer. This dual functionality is why I consider CharmHealth the best for telehealth and EHR features.

Standout Features & Integrations:

CharmHealth offers features such as electronic superbill, automatic payment posting, and robust reporting. Additionally, it supports telehealth appointments, electronic prescriptions, and even wearable device integration for comprehensive patient care. It also integrates with various labs, pharmacies, and other medical systems, ensuring smooth information flow throughout the care process.


CharmHealth's pricing starts from $10/user/month. This price includes all essential medical billing features plus telehealth and EHR functionality.


  • Integrated telehealth and EHR features
  • Comprehensive billing management
  • Broad range of integrations


  • May require a learning curve for those unfamiliar with EHR systems
  • Higher costs for additional modules
  • Interface may seem outdated compared to newer platforms

4. Medisoft - Best for affordability without sacrificing features

Medisoft medical billing software dashboard
Medisoft's patient dashboard

Medisoft is a user-friendly medical billing software that offers an affordable solution without cutting corners on features. With Medisoft, you get access to all the essentials you need to handle billing for your medical practice efficiently.

Why I Picked Medisoft:

Medisoft made its way onto my list because it successfully bridges the gap between affordability and functionality. I've found that many affordable software options lack key features, but that's not the case with Medisoft. It's priced reasonably while still offering robust features, and that's why I think it's the best for those seeking affordability without sacrificing features.

Standout Features & Integrations:

Medisoft offers features like electronic claims submission, patient ledgers, and appointment scheduling, providing a comprehensive billing solution. It integrates well with a range of EHR systems, including RelayHealth, Trizetto, and Availity, ensuring data flow across platforms.


Medisoft pricing starts from $69/user/month, offering robust features at an affordable cost.


  • Affordable yet feature-rich
  • User-friendly interface
  • Good range of EHR integrations


  • Fewer advanced features than some competitors
  • Does not include telehealth functionality
  • May be less suitable for larger practices

5. AllegianceMD - Best for artificial intelligence utilization

AllegianceMD patient chart dashboard
AllegianceMD's patient chart dashboard

AllegianceMD is a web-based medical billing software that brings artificial intelligence (AI) into your practice's billing processes. It leverages AI to streamline workflows, making claim management, patient billing, and coding more efficient and accurate.

Why I Picked AllegianceMD:

The primary reason I picked AllegianceMD for this list is its effective use of artificial intelligence. In the ever-evolving landscape of healthcare, it's crucial to stay ahead, and AllegianceMD does that with its innovative use of AI. This tool stands out for its futuristic approach to medical billing, making it the best for practices that want to utilize AI in their operations.

Standout Features & Integrations:

AllegianceMD provides an AI-powered billing rules engine, automatic claim scrubbing, and electronic remittance advice features, bringing a new level of efficiency to medical billing. It also integrates with various EHR systems and clearinghouses, ensuring that your practice's systems communicate effectively.


AllegianceMD's pricing starts from $149/user/month (billed annually), providing access to its AI-powered features and integrations.


  • AI-powered features for greater efficiency
  • Robust integrations with EHR systems and clearinghouses
  • Comprehensive features covering the full medical billing process


  • More expensive than some other options
  • May have a steeper learning curve due to advanced features
  • Annual billing might not suit all practices

6. TotalMD - Best for flexible deployment options

TotalMD Billing software dashboard
The TotalMD user dashboard

TotalMD is a medical billing software that provides comprehensive functionality with the added benefit of flexible deployment. Whether you prefer a cloud-based solution or a server-based one, TotalMD caters to your needs without compromising features and functionality.

Why I Picked TotalMD:

I selected TotalMD for this list primarily due to its versatility in deployment options. In the realm of medical billing software, the need for adaptability is paramount, and TotalMD delivers on this front. The ability to choose between cloud-based and on-premise solutions makes it distinct and best for those looking for flexible deployment options.

Standout Features & Integrations:

TotalMD's features include billing and scheduling, document management, and integrated credit card processing. The platform also provides extensive integrations with labs, clearinghouses, and EHR vendors, contributing to a cohesive healthcare management ecosystem.


Pricing for TotalMD starts from $99/user/month, providing comprehensive access to its adaptable features and integrations.


  • Flexible deployment options cater to various needs
  • Wide range of features for comprehensive billing management
  • Numerous integrations provide a cohesive ecosystem


  • Initial setup and migration can be complex
  • Some users may find the interface dated
  • Pricing might be high for small practices

7. SAP Concur - Best for combining billing with travel and expense management

SAP Concur analytics dashboard
SAP Concur's analytics dashboard

SAP Concur is a software tool that combines travel, expense, and invoice management into one system. Its integrated approach not only streamlines the billing process but also provides a complete view of your organization's spending, making it ideal for entities with considerable travel and expense requirements.

Why I Picked SAP Concur:

I chose SAP Concur because of its unique capacity to integrate billing, travel, and expense management, something that's not common in other tools. This distinctive feature makes it stand out and establishes it as the best tool for organizations that need to manage and track these particular aspects closely.

Standout Features & Integrations:

SAP Concur offers features like invoice automation, integration with travel booking systems, and detailed expense reporting. It integrates well with many enterprise resource planning (ERP) systems, CRM platforms, and various travel booking systems, making it a unified solution for managing business expenses.


Pricing for SAP Concur starts from $8/user/month, providing a unique integrated solution for managing billing, travel, and expenses.


  • Combines billing with travel and expense management
  • Extensive integrations with ERP systems and travel booking platforms
  • Offers detailed and insightful expense reports


  • Learning curve can be steep due to its wide range of features
  • Customization options may be limited
  • Customer service could be improved

8. Billiyo - Best for post-acute care providers

Billiyo scheduling dashboard
Billiyo's scheduling chart

Billiyo is a comprehensive healthcare management platform that empowers post-acute care providers with tools for revenue cycle management, electronic health record keeping, and more. With its specialized focus on post-acute care, it is ideal for healthcare providers in this sector seeking a tailored solution.

Why I Picked Billiyo:

I chose Billiyo for its specialization in post-acute care, a niche that many similar tools don't cater to. It stands out with its dedication to delivering tools and services that suit the unique requirements of post-acute care providers, making it the best choice in this particular category.

Standout Features & Integrations:

Billiyo offers important features such as real-time eligibility checking, automated claim scrubbing, and electronic health record keeping. It also integrates with other healthcare systems, including electronic visit verification systems and various pharmacy systems.


Billiyo's pricing starts from $10/user/month, a competitive rate given its specialized focus.


  • Specialized solution for post-acute care providers
  • Robust features like real-time eligibility checking and automated claim scrubbing
  • Seamless integrations with other healthcare systems


  • Might be too specialized for healthcare providers outside the post-acute care sector
  • Pricing might be a little high for smaller organizations
  • Limited international usage and support

9. Juvonno - Best for clinics with diverse disciplines

Juvonno web based billing software dashboard
Juvonno's patient chart dashboard

Juvonno is a healthcare management software that provides scheduling, billing, and charting capabilities for clinics with varied disciplines. The platform is versatile and supports multidisciplinary clinics, which aligns perfectly with its aptitude for handling diversity in healthcare disciplines.

Why I Picked Juvonno:

I picked Juvonno due to its versatile nature, which allows it to serve clinics with various disciplines. Its ability to cater to such a diverse range makes it distinct among its competitors. Moreover, it's the tool's adaptability that made me judge it as the best for multidisciplinary clinics.

Standout Features & Integrations:

Key features of Juvonno include appointment scheduling, billing management, patient records management, and customizable electronic medical records (EMR). As for integrations, Juvonno works smoothly with a range of third-party applications, including electronic health records (EHR) systems, accounting software, and payment processors.


Pricing for Juvonno begins at $20/user/month.


  • Versatile, suitable for a range of clinical disciplines
  • Comprehensive features like scheduling, billing, and customizable EMRs
  • Supports several crucial third-party integrations


  • Its wide range may not be ideal for clinics specializing in one area
  • Pricing may not be as affordable for smaller clinics
  • Complexity might result in a steeper learning curve for some users

10. InboxHealth - Best for patient communication and support

InboxHealth dashboard screenshot
InboxHealth's dashboard

InboxHealth is a healthcare billing software that focuses on improving patient communication and support. It streamlines the financial conversations between patients and providers, making it particularly effective for handling patient communication and support.

Why I Picked InboxHealth:

InboxHealth stood out to me because of its focus on enhancing patient communication. It's this emphasis on building a strong patient-provider financial dialogue that sets it apart from others. In comparing different platforms, it became clear to me that InboxHealth is the best for patient communication and support due to its patient-centric approach.

Standout Features & Integrations:

InboxHealth shines with features like custom payment plans, automated patient billing inquiries, and a comprehensive patient communication portal. Additionally, it integrates with a variety of EHR systems, payment gateways, and other healthcare management tools, which makes it a versatile solution for many healthcare providers.


InboxHealth pricing information is not openly available and needs to be requested from the provider.


  • Strong emphasis on patient communication and support
  • Features such as custom payment plans and automated billing inquiries
  • Versatile integration with other tools and platforms


  • Lack of transparent pricing information
  • Not focused on other aspects of healthcare management like appointment scheduling or clinical workflow
  • Its specialty in patient communication might not serve providers looking for an all-in-one solution.

11. EZClaim - Best for simplicity and ease of use

EZClaim patient dashboard
EZClaim's patient dashboard

EZClaim is a medical billing software that aims to make the billing process as simple and intuitive as possible. It is particularly suitable for small to medium-sized medical practices that are looking for an easy-to-use solution to their billing needs.

Why I Picked EZClaim:

I picked EZClaim for this list because of its focus on simplifying the complex billing process. It stands out due to its intuitive interface and straightforward functionality. When I was evaluating different tools, EZClaim was notably the best for its simplicity and ease of use.

Standout Features & Integrations:

Key features of EZClaim include its customizable reporting, automatic claim scrubbing, and patient statement services. Importantly, it integrates with a variety of electronic health record (EHR) systems, clearinghouses, and payment processing platforms, facilitating a comprehensive billing process.


Pricing starts from $125/user/month (billed annually). There is also a one-time setup fee.


  • Easy-to-use interface
  • Comprehensive integrations with other healthcare systems
  • Useful features like automatic claim scrubbing and customizable reporting


  • Higher starting price compared to some other options
  • One-time setup fee is additional to the monthly cost
  • Might not have advanced features required by large-scale healthcare providers

12. Easy Billing Professional - Best for customization options and robust features

Easy Billing Professional patient status dashboard
Easy Billing Professional's patient status dashboard

Easy Billing Professional is a comprehensive medical billing software equipped with a plethora of customizable template options. It enables healthcare providers to manage and streamline their billing processes while adapting to their unique workflows, making it best for those seeking customization options and robust features.

Why I Picked Easy Billing Professional:

I chose Easy Billing Professional for this list due to its highly configurable nature and extensive set of features. It stood out during my assessment as the best choice for organizations looking for a flexible tool to cater to their diverse and specific needs. The tool's rich feature set and customization possibilities were compelling factors in my decision.

Standout Features & Integrations:

Easy Billing Professional offers numerous essential features such as advanced analytics, claim scrubbing, insurance eligibility checking, and automatic reminders. It integrates with leading EHR and EMR systems, ensuring a smooth exchange of information between the different platforms used within healthcare settings.


Pricing for Easy Billing Professional starts from $59/user/month. Please note that this is the starting price, and additional costs may apply for advanced features and customizations.


  • High level of customization options
  • Robust feature set
  • Seamless integrations with leading EHR and EMR systems


  • Might be complex for users seeking simplicity
  • Starting price might be high for smaller practices
  • Additional costs for advanced features and customizations

Other Web Based Medical Billing Software

Below is a list of additional web based medical billing software that I shortlisted but did not make it to the top 12. Definitely worth checking them out.

  1. Kareo Billing - Good for independent practices looking for a comprehensive solution
  2. Billings Pro - Good for small businesses and freelancers seeking easy time tracking and invoicing
  3. Visolve Medical Billing Module - Good for streamlining insurance claim processing
  4. Mobile Mediclaim - Good for on-the-go claim submission and tracking
  5. DrChrono - Good for cross-platform functionality
  6. PatientClick Suite - Good for telemedicine and EHR functionalities in one platform
  7. PulsePro Practice Management - Good for patient data management and scheduling
  8. Cortex EDI - Good for effective management of electronic claims and remittances
  9. AMS Ultra Charts - Good for integrating EMR, practice management, and billing functionalities

Selection Criteria for Web Based Medical Billing Software

In my quest to provide a comprehensive list of the best medical billing software, I've personally tried and researched numerous tools. This diligent examination has enabled me to identify a set of criteria that matter the most when selecting a medical billing platform. While testing each tool, I had a specific set of functionalities in mind that I believe are fundamental to the smooth operation of medical billing systems.

Core Functionality

A medical billing software should be able to:

  • Process patient billing information
  • Submit claims to insurance companies
  • Follow up on unpaid claims
  • Create reports on revenue trends

Key Features

Here are a few key features that a good medical billing software should have:

  • Electronic Health Records (EHR) Integration: This enables the transfer of patient data from the EHR system to the billing software.
  • Claim Scrubbing: This feature checks claims for errors before they're sent to payers, reducing denials and rejections.
  • Reporting Capabilities: Detailed reports on revenue trends, unpaid claims, and other financial metrics are crucial for revenue cycle management.
  • Patient Eligibility Verification: This checks a patient's insurance coverage to confirm they're eligible for the planned services.


In terms of design and usability, a medical billing software should offer:

  • Intuitive Interface: Medical billing can be complex. Therefore, the software needs to have a clean, organized interface that makes it easy to find and input information.
  • Easy Onboarding: Comprehensive training resources, such as videos, manuals, and webinars, are important for quickly getting up to speed with the software.
  • Helpful Customer Support: Prompt and helpful customer support is vital, especially when dealing with billing, which directly affects a clinic's revenue.
  • Accessible Anywhere: Cloud-based software that's accessible from anywhere, not just a specific workstation, provides greater flexibility.

People Also Ask (FAQs)

What are the benefits of using web-based medical billing software?

Web based medical billing software offers several advantages, including:

  • Ease of access: As they're cloud-based, these tools can be accessed from any location and device with internet connectivity, providing flexibility to users.
  • Automatic updates: Updates and improvements are directly implemented by the service provider, ensuring users always have the latest version without needing to manually update the software.
  • Lower initial costs: There are no upfront costs for hardware or infrastructure as the software is hosted on the service provider's servers.
  • Scalability: Web-based software can easily scale up or down depending on the size and needs of the healthcare facility, making it suitable for both small clinics and large hospitals.
  • Enhanced security: Service providers generally offer robust security measures including encryption, secure data transfer, and backup to ensure patient data is secure and HIPAA compliant.

How much do these web-based medical billing tools cost?

The pricing of web based medical billing software can greatly vary, often depending on the size of the practice, the number of users, and the features included. Typically, pricing models can be subscription-based, where users pay a monthly or annual fee, or usage-based, where the cost is dependent on the volume of claims processed or patients billed.

What is the typical range of pricing for these tools?

On average, pricing can range from around $70 to $500 per user per month. However, it's important to note that some high-end solutions tailored to large practices or hospitals might charge more.

Which is the cheapest and the most expensive software?

Among the tools I've mentioned, EZClaim appears to be one of the least expensive, with a starting price of $125 per month. On the other hand, Kareo Billing stands as one of the more expensive options, starting at $500 per user per month.

Are there any free options available?

As of my latest research, none of the tools on this list offer a completely free plan. However, many offer a free trial or demo, which allows you to test the software before committing to a purchase. Always check the company's website for the most up-to-date information.

Other Healthcare Software Reviews


Choosing the best web based medical billing software for your healthcare facility hinges on several important factors. These include identifying the core functionality you require, scrutinizing key features, and evaluating the software's usability in terms of design, onboarding, and customer support.

Key takeaways:

  1. Identify Your Needs: The first step is to understand the unique needs of your healthcare facility. Some practices might prioritize ease of use and simplicity, while others may require a range of customization options or a particular integration.
  2. Examine The Features: A thorough analysis of the key features each software offers can help to narrow down your options. Features to consider might include the ability to handle multiple types of billing, integration with EHR systems, and tools for claim tracking or patient communication.
  3. Test The Usability: Considering the usability of the software is vital, as this directly impacts user satisfaction and efficiency. Look for intuitive interfaces, robust customer support, and effective onboarding processes.

What Do You Think?

The search for the ideal web based medical billing software involves careful consideration of your unique needs, an in-depth exploration of available features, and an assessment of each tool's usability. No one-size-fits-all solution exists. It's about finding the software that provides the right balance of features, pricing, and user experience for your healthcare facility.

I hope this guide aids in your search for the perfect tool to streamline your medical billing processes. Have you come across any other noteworthy web based medical billing software not mentioned in this guide? Feel free to share your recommendations.

John Payne
By John Payne

John Payne is the co-founder and company director of Symphony Health. With over 20 years of management experience John is working alongside his wife, Dr. Kate Payne to build a multi-site Medical Practice where staff work collaboratively for the good of their patients. John is passionate about improving access to quality Healthcare in North Vancouver and sharing best practice with other people managing medical practices.